sparknlp_jsl.annotator.generic_classifier.generic_classifier#

Module Contents#

Classes#

GenericClassifierApproach

Trains a TensorFlow model for generic classification of feature vectors. It takes FEATURE_VECTOR annotations from

GenericClassifierModel

Generic classifier of feature vectors. It takes FEATURE_VECTOR annotations from

class GenericClassifierApproach(classname='com.johnsnowlabs.nlp.annotators.generic_classifier.GenericClassifierApproach')#

Bases: sparknlp_jsl.common.AnnotatorApproachInternal, sparknlp_jsl.common.HasEngine, sparknlp_jsl.annotator.handle_exception_params.HandleExceptionParams

Trains a TensorFlow model for generic classification of feature vectors. It takes FEATURE_VECTOR annotations from FeaturesAssembler` as input, classifies them and outputs CATEGORY annotations.

Input Annotation types

Output Annotation type

FEATURE_VECTOR

CATEGORY

Parameters:
  • labelColumn – Column with one label per document

  • batchSize – Size for each batch in the optimization process

  • epochsN – Number of epochs for the optimization process

  • learningRate – Learning rate for the optimization proces

  • dropou – Dropout at the output of each laye

  • validationSplit – Validaiton split - how much data to use for validation

  • modelFile – File name to load the mode from

  • fixImbalance – A flag indicating whenther to balance the trainig set

  • multiClass – Return only the label with the highest confidence score or all labels

  • featureScaling – Feature scaling method. Possible values are ‘zscore’, ‘minmax’ or empty (no scaling)

  • outputLogsPath – Path to folder where logs will be saved. If no path is specified, the logs won’t be stored in disk. The path can be a local file path, a distributed file path (HDFS, DBFS), or a cloud storage (S3).

Examples

>>> import sparknlp
>>> from sparknlp.base import *
>>> from sparknlp_jsl.common import *
>>> from sparknlp.annotator import *
>>> from sparknlp.training import *
>>> import sparknlp_jsl
>>> from sparknlp_jsl.base import *
>>> from sparknlp_jsl.annotator import *
>>> from pyspark.ml import Pipeline
>>> features_asm = FeaturesAssembler()     ...    .setInputCols(["feature_1", "feature_2", "...", "feature_n"])     ...    .setOutputCol("features")
...
>>> gen_clf = GenericClassifierApproach() \
...    .setLabelColumn("target") \
...    .setInputCols(["features"]) \
...    .setOutputCol("prediction") \
...    .setModelFile("/path/to/graph_file.pb") \
...    .setEpochsNumber(50) \
...    .setBatchSize(100) \
...    .setFeatureScaling("zscore") \
...    .setlearningRate(0.001) \
...    .setFixImbalance(True) \
...    .setOutputLogsPath("logs") \
...    .setValidationSplit(0.2) # keep 20% of the data for validation purposes
...
>>> pipeline = Pipeline().setStages([
...    features_asm,
...    gen_clf
...])
...
>>> clf_model = pipeline.fit(data)
batchSize#
doExceptionHandling#
dropout#
engine#
epochsN#
featureScaling#
fixImbalance#
getter_attrs = []#
inputAnnotatorTypes#
inputCols#
labelColumn#
lazyAnnotator#
learningRate#
modelFile#
multiClass#
optionalInputAnnotatorTypes = []#
outputAnnotatorType#
outputCol#
outputLogsPath#
skipLPInputColsValidation = True#
validationSplit#
clear(param)#

Clears a param from the param map if it has been explicitly set.

copy(extra=None)#

Creates a copy of this instance with the same uid and some extra params. This implementation first calls Params.copy and then make a copy of the companion Java pipeline component with extra params. So both the Python wrapper and the Java pipeline component get copied.

Parameters:

extra (dict, optional) – Extra parameters to copy to the new instance

Returns:

Copy of this instance

Return type:

JavaParams

explainParam(param)#

Explains a single param and returns its name, doc, and optional default value and user-supplied value in a string.

explainParams()#

Returns the documentation of all params with their optionally default values and user-supplied values.

extractParamMap(extra=None)#

Extracts the embedded default param values and user-supplied values, and then merges them with extra values from input into a flat param map, where the latter value is used if there exist conflicts, i.e., with ordering: default param values < user-supplied values < extra.

Parameters:

extra (dict, optional) – extra param values

Returns:

merged param map

Return type:

dict

fit(dataset, params=None)#

Fits a model to the input dataset with optional parameters.

New in version 1.3.0.

Parameters:
  • dataset (pyspark.sql.DataFrame) – input dataset.

  • params (dict or list or tuple, optional) – an optional param map that overrides embedded params. If a list/tuple of param maps is given, this calls fit on each param map and returns a list of models.

Returns:

fitted model(s)

Return type:

Transformer or a list of Transformer

fitMultiple(dataset, paramMaps)#

Fits a model to the input dataset for each param map in paramMaps.

New in version 2.3.0.

Parameters:
  • dataset (pyspark.sql.DataFrame) – input dataset.

  • paramMaps (collections.abc.Sequence) – A Sequence of param maps.

Returns:

A thread safe iterable which contains one model for each param map. Each call to next(modelIterator) will return (index, model) where model was fit using paramMaps[index]. index values may not be sequential.

Return type:

_FitMultipleIterator

getEngine()#
Returns:

Deep Learning engine used for this model”

Return type:

str

getInputCols()#

Gets current column names of input annotations.

getLazyAnnotator()#

Gets whether Annotator should be evaluated lazily in a RecursivePipeline.

getOrDefault(param)#

Gets the value of a param in the user-supplied param map or its default value. Raises an error if neither is set.

getOutputCol()#

Gets output column name of annotations.

getParam(paramName)#

Gets a param by its name.

getParamValue(paramName)#

Gets the value of a parameter.

Parameters:

paramName (str) – Name of the parameter

hasDefault(param)#

Checks whether a param has a default value.

hasParam(paramName)#

Tests whether this instance contains a param with a given (string) name.

inputColsValidation(value)#
isDefined(param)#

Checks whether a param is explicitly set by user or has a default value.

isSet(param)#

Checks whether a param is explicitly set by user.

classmethod load(path)#

Reads an ML instance from the input path, a shortcut of read().load(path).

classmethod read()#

Returns an MLReader instance for this class.

save(path)#

Save this ML instance to the given path, a shortcut of ‘write().save(path)’.

set(param, value)#

Sets a parameter in the embedded param map.

setBatchSize(size: int)#

Size for each batch in the optimization process

Parameters:

size (int) – Size for each batch in the optimization process

setDoExceptionHandling(value: bool)#

If True, exceptions are handled. If exception causing data is passed to the model, a error annotation is emitted which has the exception message. Processing continues with the next one. This comes with a performance penalty.

Parameters:

value (bool) – If True, exceptions are handled.

setDropout(dropout: float)#

Sets drouptup

Parameters:

dropout (float) – Dropout at the output of each layer

setEpochsNumber(epochs: int)#

Sets number of epochs for the optimization process

Parameters:

epochs (int) – Number of epochs for the optimization process

setFeatureScaling(feature_scaling: str)#

Sets Feature scaling method. Possible values are ‘zscore’, ‘minmax’ or empty (no scaling

Parameters:

feature_scaling (str) – Feature scaling method. Possible values are ‘zscore’, ‘minmax’ or empty (no scaling

setFixImbalance(fix_imbalance: bool)#

Sets A flag indicating whenther to balance the trainig set.

Parameters:

fix_imbalance (bool) – A flag indicating whenther to balance the trainig set.

setForceInputTypeValidation(etfm)#
setInputCols(*value)#

Sets column names of input annotations.

Parameters:

*value (List[str]) – Input columns for the annotator

setLabelCol(label_column: str)#

Sets Size for each batch in the optimization process

Parameters:

label_column (str) – Column with the value result we are trying to predict.

setLazyAnnotator(value)#

Sets whether Annotator should be evaluated lazily in a RecursivePipeline.

Parameters:

value (bool) – Whether Annotator should be evaluated lazily in a RecursivePipeline

setLearningRate(learning_rate: float)#

Sets learning rate for the optimization process

Parameters:

learning_rate (float) – Learning rate for the optimization process

setModelFile(mode_file: str)#

Sets file name to load the mode from”

Parameters:

label (str) – File name to load the mode from”

setMultiClass(value: bool)#

Sets the model in multi class prediction mode (Default: false)

Parameters:

value (bool) – Whether to return only the label with the highest confidence score or all labels

setOutputCol(value)#

Sets output column name of annotations.

Parameters:

value (str) – Name of output column

setOutputLogsPath(output_logs_path: str)#

Sets path to folder where logs will be saved. If no path is specified, no logs are generated

Parameters:

output_logs_path (str) – Path to folder where logs will be saved. If no path is specified, no logs are generated

setParamValue(paramName)#

Sets the value of a parameter.

Parameters:

paramName (str) – Name of the parameter

setValidationSplit(validation_split: float)#

Sets validaiton split - how much data to use for validation

Parameters:

validation_split (float) – Validaiton split - how much data to use for validation

write()#

Returns an MLWriter instance for this ML instance.

class GenericClassifierModel(classname='com.johnsnowlabs.nlp.annotators.generic_classifier.GenericClassifierModel', java_model=None)#

Bases: sparknlp_jsl.common.AnnotatorModelInternal, sparknlp_jsl.annotator.handle_exception_params.HandleExceptionParams

Generic classifier of feature vectors. It takes FEATURE_VECTOR annotations from FeaturesAssembler` as input, classifies them and outputs CATEGORY annotations.

Input Annotation types

Output Annotation type

FEATURE_VECTOR

CATEGORY

Parameters:
  • multiClass – Return only the label with the highest confidence score or all labels

  • featureScaling – Feature scaling method. Possible values are ‘zscore’, ‘minmax’ or empty (no scaling)

Examples

>>> import sparknlp
>>> from sparknlp.base import *
>>> from sparknlp_jsl.common import *
>>> from sparknlp.annotator import *
>>> from sparknlp.training import *
>>> import sparknlp_jsl
>>> from sparknlp_jsl.base import *
>>> from sparknlp_jsl.annotator import *
>>> from pyspark.ml import Pipeline
>>> features_asm = FeaturesAssembler() \
...    .setInputCols(["feature_1", "feature_2", "...", "feature_n"]) \
...    .setOutputCol("features")
...
>>> gen_clf = GenericClassifierModel.pretrained() \
...    .setInputCols(["features"]) \
...    .setOutputCol("prediction") \
...
>>> pipeline = Pipeline().setStages([
...    features_asm,
...    gen_clf
...])
...
>>> clf_model = pipeline.fit(data)
classes#
doExceptionHandling#
featureScaling#
getter_attrs = []#
inputAnnotatorTypes#
inputCols#
lazyAnnotator#
multiClass#
name = GenericClassifierModel#
optionalInputAnnotatorTypes = []#
outputAnnotatorType#
outputCol#
skipLPInputColsValidation = True#
clear(param)#

Clears a param from the param map if it has been explicitly set.

copy(extra=None)#

Creates a copy of this instance with the same uid and some extra params. This implementation first calls Params.copy and then make a copy of the companion Java pipeline component with extra params. So both the Python wrapper and the Java pipeline component get copied.

Parameters:

extra (dict, optional) – Extra parameters to copy to the new instance

Returns:

Copy of this instance

Return type:

JavaParams

explainParam(param)#

Explains a single param and returns its name, doc, and optional default value and user-supplied value in a string.

explainParams()#

Returns the documentation of all params with their optionally default values and user-supplied values.

extractParamMap(extra=None)#

Extracts the embedded default param values and user-supplied values, and then merges them with extra values from input into a flat param map, where the latter value is used if there exist conflicts, i.e., with ordering: default param values < user-supplied values < extra.

Parameters:

extra (dict, optional) – extra param values

Returns:

merged param map

Return type:

dict

getInputCols()#

Gets current column names of input annotations.

getLazyAnnotator()#

Gets whether Annotator should be evaluated lazily in a RecursivePipeline.

getOrDefault(param)#

Gets the value of a param in the user-supplied param map or its default value. Raises an error if neither is set.

getOutputCol()#

Gets output column name of annotations.

getParam(paramName)#

Gets a param by its name.

getParamValue(paramName)#

Gets the value of a parameter.

Parameters:

paramName (str) – Name of the parameter

hasDefault(param)#

Checks whether a param has a default value.

hasParam(paramName)#

Tests whether this instance contains a param with a given (string) name.

inputColsValidation(value)#
isDefined(param)#

Checks whether a param is explicitly set by user or has a default value.

isSet(param)#

Checks whether a param is explicitly set by user.

classmethod load(path)#

Reads an ML instance from the input path, a shortcut of read().load(path).

static pretrained(name='genericclassifier_sdoh_housing_insecurity_sbiobert_cased_mli', lang='en', remote_loc='clinical/models')#

Downloads and loads a pretrained model.

Parameters:
  • name (str, optional) – Name of the pretrained model, by default “genericclassifier_sdoh_housing_insecurity_sbiobert_cased_mli”

  • lang (str, optional) – Language of the pretrained model, by default “en”

  • remote_loc (str, optional) – Optional remote address of the resource, by default None. Will use Spark NLPs repositories otherwise.

Returns:

The restored model

Return type:

GenericClassifierModel

classmethod read()#

Returns an MLReader instance for this class.

save(path)#

Save this ML instance to the given path, a shortcut of ‘write().save(path)’.

set(param, value)#

Sets a parameter in the embedded param map.

setDoExceptionHandling(value: bool)#

If True, exceptions are handled. If exception causing data is passed to the model, a error annotation is emitted which has the exception message. Processing continues with the next one. This comes with a performance penalty.

Parameters:

value (bool) – If True, exceptions are handled.

setFeatureScaling(feature_scaling: str)#

Sets Feature scaling method. Possible values are ‘zscore’, ‘minmax’ or empty (no scaling)

Parameters:

feature_scaling (str) – Feature scaling method. Possible values are ‘zscore’, ‘minmax’ or empty (no scaling)

setForceInputTypeValidation(etfm)#
setInputCols(*value)#

Sets column names of input annotations.

Parameters:

*value (List[str]) – Input columns for the annotator

setLazyAnnotator(value)#

Sets whether Annotator should be evaluated lazily in a RecursivePipeline.

Parameters:

value (bool) – Whether Annotator should be evaluated lazily in a RecursivePipeline

setMultiClass(value: bool)#

Sets the model in multi class prediction mode (Default: false)

Parameters:

value (bool) – Whether to return only the label with the highest confidence score or all labels

setOutputCol(value)#

Sets output column name of annotations.

Parameters:

value (str) – Name of output column

setParamValue(paramName)#

Sets the value of a parameter.

Parameters:

paramName (str) – Name of the parameter

setParams()#
transform(dataset, params=None)#

Transforms the input dataset with optional parameters.

New in version 1.3.0.

Parameters:
  • dataset (pyspark.sql.DataFrame) – input dataset

  • params (dict, optional) – an optional param map that overrides embedded params.

Returns:

transformed dataset

Return type:

pyspark.sql.DataFrame

write()#

Returns an MLWriter instance for this ML instance.