Medical Question Answering Pipeline on Clinical Notes (ONNX)

import com.johnsnowlabs.nlp.pretrained.PretrainedPipeline

val qa_pipeline = PretrainedPipeline("clinical_notes_qa_base_onnx_pipeline", "en", "clinical/models")

val context = """Patient with a past medical history of hypertension for 15 years.
(Medical Transcription Sample Report)
HISTORY OF PRESENT ILLNESS:
The patient is a 74-year-old white woman who has a past medical history of hypertension for 15 years, history of CVA with no residual hemiparesis and uterine cancer with pulmonary metastases, who presented for evaluation of recent worsening of the hypertension. According to the patient, she had stable blood pressure for the past 12-15 years on 10 mg of lisinopril."""

val question = """What is the primary issue reported by patient?"""

val result = qa_pipeline.fullAnnotate([question], [context])