Pipeline to Extract Demographic Entities from Oncology Texts (langtest)

Description

This pretrained pipeline is built on the top of ner_oncology_demographics_langtest model.

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How to use


from sparknlp.pretrained import PretrainedPipeline

ner_pipeline = PretrainedPipeline("ner_oncology_demographics_langtest_pipeline", "en", "clinical/models")

result = ner_pipeline.annotate("""The patient is a 40 year old man with history of heavy smoking.""")


import com.johnsnowlabs.nlp.pretrained.PretrainedPipeline

val ner_pipeline = PretrainedPipeline("ner_oncology_demographics_langtest_pipeline", "en", "clinical/models")

val result = ner_pipeline.annotate("""The patient is a 40 year old man with history of heavy smoking.""")

Results

|    | chunks      |   begin |   end | entities       |
|---:|:------------|--------:|------:|:---------------|
|  0 | 40 year old |      17 |    27 | Age            |
|  1 | man         |      29 |    31 | Gender         |
|  2 | smoking     |      55 |    61 | Smoking_Status |

Model Information

Model Name: ner_oncology_demographics_langtest_pipeline
Type: pipeline
Compatibility: Healthcare NLP 5.1.0+
License: Licensed
Edition: Official
Language: en
Size: 1.7 GB

Included Models

  • DocumentAssembler
  • SentenceDetectorDLModel
  • TokenizerModel
  • WordEmbeddingsModel
  • MedicalNerModel
  • NerConverter