Description
This pretrained pipeline is built on the top of ner_abbreviation_clinical model.
How to use
pipeline = PretrainedPipeline("ner_abbreviation_clinical_pipeline", "en", "clinical/models")
pipeline.annotate("Gravid with estimated fetal weight of 6-6/12 pounds. LOWER EXTREMITIES: No edema. LABORATORY DATA: Laboratory tests include a CBC which is normal. Blood Type: AB positive. Rubella: Immune. VDRL: Nonreactive. Hepatitis C surface antigen: Negative. HIV: Negative. One-Hour Glucose: 117. Group B strep has not been done as yet.")
val pipeline = new PretrainedPipeline("ner_abbreviation_clinical_pipeline", "en", "clinical/models")
pipeline.annotate("Gravid with estimated fetal weight of 6-6/12 pounds. LOWER EXTREMITIES: No edema. LABORATORY DATA: Laboratory tests include a CBC which is normal. Blood Type: AB positive. Rubella: Immune. VDRL: Nonreactive. Hepatitis C surface antigen: Negative. HIV: Negative. One-Hour Glucose: 117. Group B strep has not been done as yet.")
import nlu
nlu.load("en.med_ner.clinical-abbreviation.pipeline").predict("""Gravid with estimated fetal weight of 6-6/12 pounds. LOWER EXTREMITIES: No edema. LABORATORY DATA: Laboratory tests include a CBC which is normal. Blood Type: AB positive. Rubella: Immune. VDRL: Nonreactive. Hepatitis C surface antigen: Negative. HIV: Negative. One-Hour Glucose: 117. Group B strep has not been done as yet.""")
Results
+-----+---------+
|chunk|ner_label|
+-----+---------+
|CBC |ABBR |
|AB |ABBR |
|VDRL |ABBR |
|HIV |ABBR |
+-----+---------+
Model Information
| Model Name: | ner_abbreviation_clinical_pipeline |
| Type: | pipeline |
| Compatibility: | Healthcare NLP 3.4.1+ |
| License: | Licensed |
| Edition: | Official |
| Language: | en |
| Size: | 1.7 GB |
Included Models
- DocumentAssembler
- SentenceDetectorDLModel
- TokenizerModel
- WordEmbeddingsModel
- MedicalNerModel
- NerConverter