`sparkocr.utils.svs.tile_extraction`#

Module Contents#

Functions#

`chunk`(lst, n)	Yield successive n-sized chunks from lst.
`extract_tile`(args)
`find_thumbnail_page`(tif)	Finds the thumbnail page using Aperio SVS conventions.
`get_mid_level_tiles`(flat_tiles_folder[, output_folder])
`get_optimal_workers_and_batch`([mem_per_worker_gb, ...])	Calculate optimal number of workers and batch size based on system memory and CPU.
`process_svs`(svs_file, output_root, num_workers[, ...])
`svs_to_tiles`(input_path, output_root[, level, thumbnail])

chunk(lst, n)#: Yield successive n-sized chunks from lst.

extract_tile(args)#

find_thumbnail_page(tif)#: Finds the thumbnail page using Aperio SVS conventions.

get_mid_level_tiles(flat_tiles_folder, output_folder=None)#

get_optimal_workers_and_batch(mem_per_worker_gb=1.5, ram_fraction=0.75, min_batch=1, max_batch=8)#: Calculate optimal number of workers and batch size based on system memory and CPU. Leaves headroom (e.g., 35%) to avoid saturation.

process_svs(svs_file, output_root, num_workers, level='auto', thumbnail=False)#

svs_to_tiles(input_path, output_root, level='auto', thumbnail=False)#