Social Determinants of Healthcare for Violence and Abuse Classifier ONNX

Description

The Violence and Abuse classifier employs MedicalBertForSequenceClassification embeddings within a robust classifier architecture. Trained on a diverse dataset, this model provides accurate label assignments and confidence scores for its predictions. The primary goal of this model is to categorize text into four key labels: Domestic_Violence_Abuse, Personal_Violence_Abuse, No_Violence_Abuse and Unknown.

  • Domestic_Violence_Abuse:This category refers to a pattern of behavior in any relationship that is aimed at gaining or maintaining power and control over an intimate partner or family member.

  • Personal_Violence_Abuse: This category encompasses any form of violence or abuse that is directed towards an individual, whether admitted by the perpetrator or recognized by the victim.

  • No_Violence_Abuse: This category denotes the complete absence of violence and abuse in any form.

  • Unknown: This category covers when the nature or type of violence or abuse within a given text cannot be clearly identified or defined.

Predicted Entities

Domestic_Violence_Abuse, Personal_Violence_Abuse, No_Violence_Abuse, Unknown

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How to use

document_assembler = DocumentAssembler() \
    .setInputCol("text") \
    .setOutputCol("document")

tokenizer = Tokenizer() \
    .setInputCols(["document"]) \
    .setOutputCol("token")

sequence_classifier = MedicalBertForSequenceClassification.pretrained("bert_sequence_classifier_sdoh_violence_abuse_onnx", "en", "clinical/models")\
  .setInputCols(["document", "token"])\
  .setOutputCol("class")

pipeline = Pipeline(stages=[
    document_assembler, 
    tokenizer,
    sequence_classifier    
])

sample_texts = [
                ["Repeated visits for fractures, with vague explanations suggesting potential family-related trauma."],
                ["Patient presents with multiple bruises in various stages of healing, suggestive of repeated physical abuse."],
                ["There are no reported instances or documented episodes indicating the patient poses a risk of violence."] ,
                ["Patient B is a 40-year-old female who was diagnosed with breast cancer. She has received a treatment plan that includes surgery, chemotherapy, and radiation therapy."]
                ]

data = spark.createDataFrame(sample_texts).toDF("text")

model = pipeline.fit(data)
result = model.transform(data)
document_assembler = nlp.DocumentAssembler() \
    .setInputCol("text") \
    .setOutputCol("document")

tokenizer = nlp.Tokenizer() \
    .setInputCols(["document"]) \
    .setOutputCol("token")

sequenceClassifier = medical.BertForSequenceClassification.pretrained("bert_sequence_classifier_sdoh_violence_abuse_onnx", "en", "clinical/models")\
    .setInputCols(["document","token"])\
    .setOutputCol("classes")

pipeline = nlp.Pipeline(stages=[
    document_assembler,
    tokenizer,
    sequenceClassifier
])

sample_texts = [
                ["Repeated visits for fractures, with vague explanations suggesting potential family-related trauma."],
                ["Patient presents with multiple bruises in various stages of healing, suggestive of repeated physical abuse."],
                ["There are no reported instances or documented episodes indicating the patient poses a risk of violence."] ,
                ["Patient B is a 40-year-old female who was diagnosed with breast cancer. She has received a treatment plan that includes surgery, chemotherapy, and radiation therapy."]
                ]

data = spark.createDataFrame(sample_texts).toDF("text")

model = pipeline.fit(data)
result = model.transform(data)

val document_assembler = new DocumentAssembler() 
    .setInputCol("text") 
    .setOutputCol("document")

val tokenizer = new Tokenizer() 
    .setInputCols(Array("document")) 
    .setOutputCol("token")

val sequenceClassifier = MedicalBertForSequenceClassification.pretrained("bert_sequence_classifier_sdoh_violence_abuse_onnx", "en", "clinical/models")
  .setInputCols(Array("document","token"))
  .setOutputCol("class")

val pipeline = new Pipeline().setStages(Array(document_assembler, tokenizer, sequenceClassifier))
val data = Seq(Array("Repeated visits for fractures, with vague explanations suggesting potential family-related trauma.",
                     "Patient presents with multiple bruises in various stages of healing, suggestive of repeated physical abuse.",
                     "There are no reported instances or documented episodes indicating the patient poses a risk of violence." ,
                     "Patient B is a 40-year-old female who was diagnosed with breast cancer. She has received a treatment plan that includes surgery, chemotherapy, and radiation therapy.",
                    )).toDF("text")

val model = pipeline.fit(data)
val result = model.transform(data)

Results


+----------------------------------------------------------------------------------------------------+-------------------------+
|                                                                                                text|                   result|
+----------------------------------------------------------------------------------------------------+-------------------------+
|  Repeated visits for fractures, with vague explanations suggesting potential family-related trauma.|[Domestic_Violence_Abuse]|
|Patient presents with multiple bruises in various stages of healing, suggestive of repeated physi...|[Personal_Violence_Abuse]|
|There are no reported instances or documented episodes indicating the patient poses a risk of vio...|      [No_Violence_Abuse]|
|Patient B is a 40-year-old female who was diagnosed with breast cancer. She has received a treatm...|                [Unknown]|
+----------------------------------------------------------------------------------------------------+-------------------------+

Model Information

Model Name: bert_sequence_classifier_sdoh_violence_abuse_onnx
Compatibility: Healthcare NLP 6.1.1+
License: Licensed
Edition: Official
Input Labels: [document, token]
Output Labels: [label]
Language: en
Size: 437.7 MB
Case sensitive: true