Description
This pretrained pipeline is built on the top of ner_oncology_unspecific_posology_healthcare model.
How to use
from sparknlp.pretrained import PretrainedPipeline
pipeline = PretrainedPipeline("ner_oncology_unspecific_posology_healthcare_pipeline", "en", "clinical/models")
text = "
he patient underwent a regimen consisting of adriamycin (60 mg/m2) and cyclophosphamide (600 mg/m2) over six courses. She is currently receiving his second cycle of chemotherapy and is in good overall condition.
"
result = pipeline.fullAnnotate(text)
import com.johnsnowlabs.nlp.pretrained.PretrainedPipeline
val pipeline = new PretrainedPipeline("ner_oncology_unspecific_posology_healthcare_pipeline", "en", "clinical/models")
val text = "
he patient underwent a regimen consisting of adriamycin (60 mg/m2) and cyclophosphamide (600 mg/m2) over six courses. She is currently receiving his second cycle of chemotherapy and is in good overall condition.
"
val result = pipeline.fullAnnotate(text)
Results
| | chunks | begin | end | entities | confidence |
|---:|:-----------------|--------:|------:|:---------------------|-------------:|
| 0 | adriamycin | 46 | 55 | Cancer_Therapy | 0.9999 |
| 1 | 60 mg/m2 | 58 | 65 | Posology_Information | 0.807 |
| 2 | cyclophosphamide | 72 | 87 | Cancer_Therapy | 0.9998 |
| 3 | 600 mg/m2 | 90 | 98 | Posology_Information | 0.9566 |
| 4 | over six courses | 101 | 116 | Posology_Information | 0.689833 |
| 5 | second cycle | 150 | 161 | Posology_Information | 0.9906 |
| 6 | chemotherapy | 166 | 177 | Cancer_Therapy | 0.9997 |
Model Information
| Model Name: | ner_oncology_unspecific_posology_healthcare_pipeline |
| Type: | pipeline |
| Compatibility: | Healthcare NLP 4.3.0+ |
| License: | Licensed |
| Edition: | Official |
| Language: | en |
| Size: | 533.1 MB |
Included Models
- DocumentAssembler
- SentenceDetectorDLModel
- TokenizerModel
- WordEmbeddingsModel
- MedicalNerModel
- NerConverterInternalModel