RE Pipeline between Tests, Results, and Dates

Description

This pretrained pipeline is built on the top of re_test_result_date model.

Live Demo Open in Colab Copy S3 URI

How to use

from sparknlp.pretrained import PretrainedPipeline

pipeline = PretrainedPipeline("re_test_result_date_pipeline", "en", "clinical/models")

pipeline.fullAnnotate("He was advised chest X-ray or CT scan after checking his SpO2 which was <= 93%")
import com.johnsnowlabs.nlp.pretrained.PretrainedPipeline

val pipeline = new PretrainedPipeline("re_test_result_date_pipeline", "en", "clinical/models")

pipeline.fullAnnotate("He was advised chest X-ray or CT scan after checking his SpO2 which was <= 93%")
import nlu
nlu.load("en.relation.date_test_result.pipeline").predict("""He was advised chest X-ray or CT scan after checking his SpO2 which was <= 93%""")

Results

| index | relations    | entity1      | chunk1              | entity2      |  chunk2 |
|-------|--------------|--------------|---------------------|--------------|---------|
| 0     | O            | TEST         | chest X-ray         | MEASUREMENTS |  93%    | 
| 1     | O            | TEST         | CT scan             | MEASUREMENTS |  93%    |
| 2     | is_result_of | TEST         | SpO2                | MEASUREMENTS |  93%    |

Model Information

Model Name: re_test_result_date_pipeline
Type: pipeline
Compatibility: Healthcare NLP 3.4.1+
License: Licensed
Edition: Official
Language: en
Size: 1.7 GB

Included Models

  • DocumentAssembler
  • SentenceDetector
  • TokenizerModel
  • PerceptronModel
  • WordEmbeddingsModel
  • MedicalNerModel
  • NerConverter
  • DependencyParserModel
  • RelationExtractionModel